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genotype tissue expression gtex analysis


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GTEx简介 | eQTLGen | Blood eQTL - Life·Intelligence - 博客园- genotype tissue expression gtex analysis ,2020-9-23 · The Genotype-Tissue Expression (GTEx) project is an ongoing effort to build a comprehensive public resource to study tissue-specific gene expression and regulation. Samples were collected from 54 non-diseased tissue sites across nearly 1000 individuals, primarily for molecular assays including WGS, WES, and RNA-Seq. Remaining samples are available from …Genotype Tissue Expression (GTEx) Project Resources at …Genotype Tissue Expression (GTEx) Project Resources at UCSC. The Genotype Tissue Expression (GTEx) Project is a data resource and tissue bank established by the National Institutes of Health Common Fund, in order to study the relationship between genetic variation and gene expression in a variety of human tissues.A total of 53 tissues from nearly 1000 …



GTEx数据库联合TCGA做分析-生信自学网

2019-7-30 · 1、The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans 2、The human transcriptome across tissues and individuals 3、Effect of predicted protein-truncating genetic variants on the human transcriptome 关注微信公众号

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Genotype-Tissue Expression Project (GTEx) - Pathology …

Launched by the National Institutes of Health (NIH) in September 2010, the Genotype-Tissue Expression (GTEx) Project created a resource that scientists can use to study how an individual’s genetic makeup affects tissue-specific gene expression. The end result was a database and a tissue bank that are available to researchers around the world. VAI’s Pathology and …

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The Genotype-Tissue Expression (GTEx) pilot analysis ...

We present an analysis of RNA sequencing data from 1641 samples across 43 tissues from 175 individuals, generated as part of the pilot phase of the …

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The Genotype-Tissue Expression (GTEx) project

Design of the GTEx Project. The GTEx Project of the NIH Common Fund aims to establish a resource database and associated tissue bank in which to study the relationship between genetic variation and gene expression, and other molecular phenotypes, in multiple reference tissues (Supplementary Figure 1).The GTEx project began with a 2.5-year pilot phase to test the …

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The Genotype-Tissue Expression (GTEx) pilot analysis ...

2018-7-18 · The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans 一、摘要 理解遗传变异的功能后果及其如何影响复杂的人类疾病和数量性状,仍然是生物医学面临的重大挑战。

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The Genotype-Tissue Expression (GTEx) project

2014-5-26 · The Genotype-Tissue Expression (GTEx) project The GTEx Consortium * Genome-wide association studies have identified thousands of loci for common diseases, but, for the majority ... biospecimen collection and analysis methods developed during the project 0.5 1 2 5 10 20 0 0.2 0.4 0.6 0.8 1 MAF (%) Power 60 100 200 320 500 750 1,000 a 1 2 5 10 20 ...

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The Genotype-Tissue Expression (GTEx) pilot analysis ...

2018-7-18 · The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans 一、摘要 理解遗传变异的功能后果及其如何影响复杂的人类疾病和数量性状,仍然是生物医学面临的重大挑战。

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The Genotype-Tissue Expression (GTEx) pilot analysis ...

2015-5-12 · The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans The GTEx Consortium*† Understanding the functional consequences of genetic variation, and how it affects complex human disease and quantitative traits, remains a critical challenge for biomedicine. We present an analysis of RNA sequencing data from ...

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GTEx数据库-TCGA数据挖掘的好帮手 | 生信菜鸟团

2018-11-26 · The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans The human transcriptome across tissues and individuals Effect of predicted protein-truncating genetic variants on the human transcriptome 二期

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2小时搞定TCGA+GTEx联合分析,多1分钟算我输 - 知乎

2020-8-10 · GTEx(Genotype-Tissue Expression,基因型-组织表达)数据库,研究从来自449名生前健康的人类捐赠者的7000多份尸检样本,涵盖44个组织(42个不同的组织类型),包括31个实体器官组织、10个脑分区、全血、2个来自捐赠者血液和皮肤的细胞系,作者利用

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2021-04-29 TCGA与GTEX数据下载 - 简书

2021-4-29 · GTEx,全称: The Genotype-Tissue Expression (GTEx) project 首次被提出来是2013年,上百位科学家联名在Nature Genetics杂志发表的文章首次介绍了“基因型-组织表达工程”,并成立了“基因型-组织表达研究联盟”(Genotype-Tissue Expression Consortium,GTEx)以下简称“GTEx”)。

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The Genotype-Tissue Expression (GTEx) pilot analysis ...

2015-5-8 · The Genotype-Tissue Expression (GTEx) Project was designed to address this limitation by establishing a sample and data resource to enable studies of the relationship among genetic variation, gene expression, and other molecular phenotypes in multiple human tissues . To facilitate the collection of multiple different tissues per donor, the ...

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2小时搞定TCGA+GTEx联合分析,多1分钟算我输 - 知乎

2020-8-10 · GTEx(Genotype-Tissue Expression,基因型-组织表达)数据库,研究从来自449名生前健康的人类捐赠者的7000多份尸检样本,涵盖44个组织(42个不同的组织类型),包括31个实体器官组织、10个脑分区、全血、2个来自捐赠者血液和皮肤的细胞系,作者利用

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TSEA tool | Dougherty Lab: From Autism to Astrocytes

The gene expression data used in TSEA was collected using published RNA-Seq data from the Genotype-Tissue Expression project (GTEx Analysis Pilot Data 2013-01-31, summarized to genes). The GTEx project was supported by the Common Fund of the Office of the Director of the National Institutes of Health (commonfund.nih.gov/GTEx).

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Genotype-Tissue Expression Project (GTEx) - …

2022-3-7 · Launched by the National Institutes of Health (NIH) in September 2010 (See: NIH launches Genotype-Tissue Expression project), GTEx will create a resource that researchers can use to study how inherited changes in genes …

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Dataset - GTEx Tissue Gene Expression Profiles

Genotype Tissue Expression Citation(s) GTEx, Consortium et al. (2015) Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans. Science. 348:648-60. GTEx, Consortium et al. (2013) The Genotype-Tissue Expression (GTEx) project. Nat Genet. 45:580-5. Last Updated: Stats: 25557 genes; 29 tissues ...

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The Genotype-Tissue Expression (GTEx) pilot analysis ...

We present an analysis of RNA sequencing data from 1641 samples across 43 tissues from 175 individuals, generated as part of the pilot phase of the Genotype-Tissue Expression (GTEx) project. We describe the landscape of gene expression across tissues, catalog thousands of tissue-specific and shared regulatory expression quantitative trait loci ...

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2021-04-29 TCGA与GTEX数据下载 - 简书

2021-4-29 · GTEx,全称: The Genotype-Tissue Expression (GTEx) project 首次被提出来是2013年,上百位科学家联名在Nature Genetics杂志发表的文章首次介绍了“基因型-组织表达工程”,并成立了“基因型-组织表达研究联盟”(Genotype-Tissue Expression Consortium,GTEx)以下简称“GTEx”)。

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刷新认知!基因表达,男女有别|Science、Cell等发布15篇 ...

2020-9-13 · 本周,“基因型-组织表达研究联盟”(Genotype-Tissue Expression Consortium)结束了为期10年的多机构研究工作,于Science、Cell等期刊发布了斥资1.5亿美元的“基因型-组织表达项目”(The Genotype-Tissue Expression (GTEx) Project)最后一期共计15项研究

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Gene Expression in 53 tissues from GTEx RNA-seq of 8555 ...

Description. The NIH Genotype-Tissue Expression (GTEx) project was created to establish a sample and data resource for studies on the relationship between genetic variation and gene expression in multiple human tissues. This track shows median gene expression levels in 51 tissues and 2 cell lines, based on RNA-seq data from the GTEx midpoint milestone data …

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An analysis of aging-related genes derived from the ...

2018-8-20 · The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans. Science 348 , 648–660 (2015). Article Google Scholar

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Gene Expression in 53 tissues from GTEx RNA-seq of 8555 ...

Description. The NIH Genotype-Tissue Expression (GTEx) project was created to establish a sample and data resource for studies on the relationship between genetic variation and gene expression in multiple human tissues. This track shows median gene expression levels in 51 tissues and 2 cell lines, based on RNA-seq data from the GTEx midpoint milestone data …

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GTEx:基因型和基因表达量关联数据库 - 云+社区 - 腾讯云

2019-12-19 · GTEx全称如下 Genotype-Tissue Expression 该项目对来自人体多个组合和器官的样本,同时进行了转录组测序和基因分型分析,构建了一个组织特异性的基因表达和调控的数据库。

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[PDF] The Genotype-Tissue Expression (GTEx) pilot analysis ...

DOI: 10.1126/science.1262110 Corpus ID: 1831980; The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans article{Ardlie2015TheGE, title={The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans}, author={Kristin G. Ardlie and David S. DeLuca and Ayellet V. Segr{\`e} and Timothy J. Sullivan …

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